Browse of TCMCG015C12810 protein

CDS

Accession Number	TCMCG015C12810
gbkey	CDS
Protein Id	XP_027110442.1
Location	complement(join(3224449..3224563,3225395..3225777,3226235..3226420,3227213..3227389,3227579..3227710,3227872..3228090,3228325..3228402,3228559..3228624,3228704..3228784,3229200..3229984,3230698..3230894,3232232..3232326,3233078..3233218,3234150..3234227,3234476..3234604,3234887..3235021,3235257..3235376,3235455..3235506,3236373..3236504,3236869..3236921,3237020..3237115,3238329..3238474,3239181..3239316,3240440..3240593,3241170..3241316,3241437..3241765))
Gene	LOC113730144
GeneID	113730144
Organism	Coffea arabica

Protein

Length	1453aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA506972
db_source	XM_027254641.1
Definition	cleavage and polyadenylation specificity factor subunit 1-like [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTTCGCAGCGTGCAAGATGATGCACCCTCCCACCGGAATCGACAACTGCGCCTCCGGCTTCATTACTCACTCCGTCGCCGATTTCACTCCAAAATTCCCTCCAATCCAAACCGACGATCTGGACTCGGACTGGCCCTCTACTCCCAAGCCCATTGGCCCCCTCCCCAATCTCATTCTCACTTCGGCTAATGTTCTCGAGCTTTACACCCTTAGGCTTCTAGAGGAAGCTTCTTCCAGAGACTCCAAAACGCCCATTGAAGCCCAACGGGGCGGCGTCCTCGCTGGTATCTCTGGCGCTTCTCTAGAACTCGTCTGCCATTACAGACTGCATGGCAATGTGGAGTCCATGGGGATTTTATCATCGGGAGGCATTGATGGTGGGAAGAGGAGGGATTCAATTATCCTAACTTTCCAAGATGCTAAGATGTCAGTTTTGGAGTTTGATGATTCTATTCACGGGCTACGCACAAGTTCACTGCACTGTTTCGAAGGTCCAGATTGGCACCATCTTAAAAGAGGTAGAGAATCTTTTGCCAGAGGTCCATTAGTGAAGGTTGATCCGCAGGGAAGGTGTGCTGGAGTTCTTGTTTATGGTCTACAAATGGTCGTGCTCAAGGCTGCTGAGGCCACCTCTGGTTTAGTCAGTGAGGATAATGCTTCTAGTGCGGGAGGTGCAGTTTCTGCTCGCATTGAGTCATCATATATAATTAGTCTGAGAGATCTGGATATGAAGCACATAAAAGATTTTATATTTATCAATGGTTACATTGAGCCTGTGATGGTTATTCTTCATGAACGGGAGCTTACTTGGGCAGGGCGCGTCTCCTGGAAACATCACACTTGCATGATATCAGCACTTAGTATCAGCACAACATTGAGGCAGCATCCACTGATTTGGTCGGCCACTAATCTGCCTCATGATGCCTACAAGCTTCTTGCAGTGCCATCTCCTATTGGTGGAGTCCTTGTCCTCTGTGCTAATACTATTCACTATCATAGTCAGTCAACATCATGTGTACTTGCTTTGAACAACTATGCTGTTCCTATGGATAGCAGTCAAGAGATGCCAAGGTCCAATTTTATTGTGGAGCTTGATGCTGCAAACGCAACCTGGTTAACGAATGATGTAGCTATGCTGTCAGCAAAAACTGGGGAATTGCTTTTACTTACACTAATTCATGACGGGAGAATTGTTCAGAGATTGGAGCTTTCAAAGTCAAGAGCTTCAGTGCTTACTTCAGGTCTCACAACCGTTGGAAGTTCATTTGTATTTCTAGGTAGTCGTTTAGGTGACAGTATACTGGTACAGTTTACTTGTGGAGCCGGGGTGTCAGCGTTGCCCCTTGGTGCAAAGGAAGAGGTTGGAGATATTGAAGGTGATCTCCCTTCAGCAAAGCGGCTCCGAAGGTCTTCGTCTGATGCTTTGCAGGATATGGTGAATGGTGAAGAACTTTCCTTGTATGGTTCACATCCGAACAATGCACAGTCTGCCCAGAAGGCTTTTTCTTTTGCTGTGAGAGATTCCCTAACGAATGTTGGGCCGCTAAAGGACTTCTCTTATGGTTTGAGAATCAATGCTGACCCAAATGCTACTGGCATTGCTAAGCAAAGTAATTATGAACTGGTTTGCTGCTCTGGTCATGGCAAAAATGGTGCTCTTTGTGTGCTTCAGAAGTCTATCCGCCCAGAAATGATTACCCATGAATCAATACCAGGTTGCAAGGGAGTTTGGACAGTATACCACAAGAATGCACGCAGTCATGTGGTTGATTCATCAAAGGTCACAGCTGATGACGATGAATATCATGCATATTTGATTATCAGTTTGGAGACTCGTACAATGGTACTGCAGTCGGCTAATAATTTAGAGGAGGTTACCGAAAATGTTGACTATTATACCCAAGGATGTACTATTGCTGCTGGAAATTTGTTTGGAAGGCGTCTGGTCATCCAAATCTATGCTTATGGTGCTCGACTTCTTGATGGTGGGTTTATGGTTCAAGAACTGAACTTTAGGCCTCCGAATTCTGAAATTGGACCTAGTTCTGAAAGTCAAAAAGTGGCATCTGTTTCTATAGCTGATCCATATGTATTGCTGAGAATGATCGATGGAAGTATTTACCTTCTTCTTGGAGATCCATCCAGTTGCACTCTCACCACCACCAATCCAGAAGTATTTGAAAGCTCAAAGAATCTAATAACTGCTTGCACACTCTATCACGACAAAGGCCCAGAGCCATGGCTGCGGAAGACGAGTACTGATGCTTGGCTTTCTACAGGCATTGGGGAGGCAATTGATGGGTCTGATGGTGCCTCCCATGATCTGGGGGATGGATACTGTATTGTTTGCTATCAAAGTGGTGGGCTTGAGATATTTGATGTGCCTAATTTTACTTGTGTATTTTCTGTGGAAAATTTTGCATCCGGGAAAGCAATCCTCATGGACACATTTTCTCCCCACCCAGCCAAAAGTAATCAGGAAGTTGTGCAAATGATTGAGGATGTGAATGCACAAGAAAGGAAAGACAATAGTCAGAAAATAGGGGTTGTGGAATTGGCCATGCATAGGTGGGCTGGGCAACATAGCCGCCCTTTACTTTTTGGAATATTGTCAGATGGAACAATTCTTTGCTACCATGCGTTTGTTTTTGAGAATTCAGATACCGGAAGTAGAGATGAGAAACCTGTTATTTCCCAGAACTCTGGTAATCTTAGCAGTATGAATGGTTCTAGGCTTAGAAATTTGAGATTCATCCGCATCTCATTGGACACTTATGCTAGGGACGAGATACCATCTGGAACCCCATCTAAACGTTTGACCATTTTCAAGAATGTTGGTGGATTCCAAGGTTTGTTTCTCTCTGGGTCCAGACCCACTTGGTTCATGATGTTCAGGGAACGGCTTAGGATACATCCACAGCTTTGTGATGGACCTATTGTTGCTTTCACTGTTCTTCACAATGTGAACTGTAATCATGGGTTTATATACGTTACCTCTCAGGGTACACTGAAGATTTGTCAACTTCCATCCTCCTTACTATATGACAATTATTGGCCAGTACAAAAGACAACTTTGAAGGGGACTCCTCATCAGGTCACTTATTTTGCTGAGAAGAATTTGTATCCCCTTGTAGTATCATATCCAGTCCTTAAGCCGCTAAACCAAGTTCTTTCATCTCTTGTTGATCAAGAAGTTGGCCACCAGCTTGAGAATGAGACTGTGAATTTTGAAGGGATGTATCCTGTAGAAGAATTTGAGATCCGCATTATGGAACCAGAAAATTCCGGGCCTTGGCAAACAAGAGCTACAATACCAATGCAAAGTTCTGAAAACGCTCTGACTGTACGAGCGGTTACTTTGTTTAATTGCACAACAAGAGAAAATGAAACTCTTTTGGCAGTTGGAACTGCTTACGTACAAGGAGAGGATGTTGCAGCAAGAGGGCGTATTCTCTTGTTTTCAATTGAAAGAAATGCTGACAATTCTCAAATTTTAGTTTCAGAAGTTTACGCCAAAGAATTGAAAGGCGCCATATCTGCTCTAGCATCTCTCCAAGGTCATTTGCTGATAGCATCTGGTCCTAAGATTATTTTACACGAGTGGACGGGTTCTGAATTAAATGGTGTTGCCTTCTACGATGTTCCTCCTCTTTATGTTGTGAGCTTAAATATTGTTAAGAATTTTATTCTTCTTGGAGACATTCACAAAAGCATTTACTTTTTGAGTTGGAAGGAGCAAGGATCTCAGCTTAATCTATTGGCTAAGGACTTTGGTTCTCTTGATTGTCTGGCAACAGAATTTTTAATTGATGGAAATACACTGAGTCTTATGGTTTCAGATGACCAAAAGAATGTTCAGGTCTTTTCTTATTCTCCCAAGTTGTCAGAGAGTTGGAAAGGGCAGAAGCTTTTGTCCAGGGCTGAGTTTCATATTGGTGCTCATGTCACTAAGTTTTTGCGATTGCATCTGCTTCCAACATCCCCTGATCGAACTAATACTCCTGGGTCTGATAAGACAAATCGTTTTGGTCTACTTTTTGGTACCCTAGATGGGAGCATTGGCTGTATTGCACCTCTTGATGAACTAACATTTCGGAGGCTCCAGTCACTGCAGAAAAAGCTTGTAGATGCTGTTTCTCATGTTGCTGGTTTGAACCCAAGATCTTTTCGGCAATTCCGCTCTAATGGAAGGGCTCATAGGCCTGGTCCTGATAGTATAGTCGACTGTGAGCTGCTTTGCCATTATGAAATGCTTCCCTTGGAAGAGCAGCTTGAAATTGCTCACCAGATTGGAACCACTCGTATGCAGATCATATCCAACTTAAATGAACTCACTCTGGGGACCAGCTTCTTATGA

Protein:   MSFAACKMMHPPTGIDNCASGFITHSVADFTPKFPPIQTDDLDSDWPSTPKPIGPLPNLILTSANVLELYTLRLLEEASSRDSKTPIEAQRGGVLAGISGASLELVCHYRLHGNVESMGILSSGGIDGGKRRDSIILTFQDAKMSVLEFDDSIHGLRTSSLHCFEGPDWHHLKRGRESFARGPLVKVDPQGRCAGVLVYGLQMVVLKAAEATSGLVSEDNASSAGGAVSARIESSYIISLRDLDMKHIKDFIFINGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLRQHPLIWSATNLPHDAYKLLAVPSPIGGVLVLCANTIHYHSQSTSCVLALNNYAVPMDSSQEMPRSNFIVELDAANATWLTNDVAMLSAKTGELLLLTLIHDGRIVQRLELSKSRASVLTSGLTTVGSSFVFLGSRLGDSILVQFTCGAGVSALPLGAKEEVGDIEGDLPSAKRLRRSSSDALQDMVNGEELSLYGSHPNNAQSAQKAFSFAVRDSLTNVGPLKDFSYGLRINADPNATGIAKQSNYELVCCSGHGKNGALCVLQKSIRPEMITHESIPGCKGVWTVYHKNARSHVVDSSKVTADDDEYHAYLIISLETRTMVLQSANNLEEVTENVDYYTQGCTIAAGNLFGRRLVIQIYAYGARLLDGGFMVQELNFRPPNSEIGPSSESQKVASVSIADPYVLLRMIDGSIYLLLGDPSSCTLTTTNPEVFESSKNLITACTLYHDKGPEPWLRKTSTDAWLSTGIGEAIDGSDGASHDLGDGYCIVCYQSGGLEIFDVPNFTCVFSVENFASGKAILMDTFSPHPAKSNQEVVQMIEDVNAQERKDNSQKIGVVELAMHRWAGQHSRPLLFGILSDGTILCYHAFVFENSDTGSRDEKPVISQNSGNLSSMNGSRLRNLRFIRISLDTYARDEIPSGTPSKRLTIFKNVGGFQGLFLSGSRPTWFMMFRERLRIHPQLCDGPIVAFTVLHNVNCNHGFIYVTSQGTLKICQLPSSLLYDNYWPVQKTTLKGTPHQVTYFAEKNLYPLVVSYPVLKPLNQVLSSLVDQEVGHQLENETVNFEGMYPVEEFEIRIMEPENSGPWQTRATIPMQSSENALTVRAVTLFNCTTRENETLLAVGTAYVQGEDVAARGRILLFSIERNADNSQILVSEVYAKELKGAISALASLQGHLLIASGPKIILHEWTGSELNGVAFYDVPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGSQLNLLAKDFGSLDCLATEFLIDGNTLSLMVSDDQKNVQVFSYSPKLSESWKGQKLLSRAEFHIGAHVTKFLRLHLLPTSPDRTNTPGSDKTNRFGLLFGTLDGSIGCIAPLDELTFRRLQSLQKKLVDAVSHVAGLNPRSFRQFRSNGRAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQIGTTRMQIISNLNELTLGTSFL